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	<title>Undergraduate Research</title>
	<atom:link href="http://research.blogs.wm.edu/feed/" rel="self" type="application/rss+xml" />
	<link>http://research.blogs.wm.edu</link>
	<description>William &#38; Mary undergraduates doing research</description>
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		<title>Roll up those sleeves, we’re 10 days out…</title>
		<link>http://honorsfellows.blogs.wm.edu/2013/05/18/roll-up-those-sleeves-were-10-days-out/</link>
		<comments>http://honorsfellows.blogs.wm.edu/2013/05/18/roll-up-those-sleeves-were-10-days-out/#comments</comments>
		<pubDate>Sun, 19 May 2013 01:16:14 +0000</pubDate>
		<dc:creator>Aly</dc:creator>
				<category><![CDATA[Honors Thesis]]></category>
		<category><![CDATA[Research]]></category>
		<category><![CDATA[Abstract]]></category>

		<guid isPermaLink="false">http://honorsfellows.blogs.wm.edu/?p=3184</guid>
		<description><![CDATA[Hello! &#160;My name is Catherine Alyssa Brahe, but everyone calls me Aly. &#160;Now that final exams are over, grades are in, and the class of 2013 has graduated, I am officially a senior here at the College. &#160;I am a biology major with a minor in Hispanics Studies. &#160;I am also pre-med, meaning the medical&#8230;<br /><span><a href="http://honorsfellows.blogs.wm.edu/2013/05/18/roll-up-those-sleeves-were-10-days-out/">Read More</a></span>]]></description>
				<content:encoded><![CDATA[<p>Hello!  My name is Catherine Alyssa Brahe, but everyone calls me Aly.  Now that final exams are over, grades are in, and the class of 2013 has graduated, I am <em>officially</em> a senior here at the College.  I am a biology major with a minor in Hispanics Studies.  I am also pre-med, meaning the medical school application process has just begun.  With exactly 10 days until the ISC (Integrated Science Center) doors are reopened for science, it is time to roll up my sleeves and gear up for what will be the most demanding summer at William &amp; Mary.</p>
<p><span id="more-3184"></span></p>
<p>My honors thesis, &#8220;The Upstream Regulation of Xmsr, A Gene Involved in Vascular and Neural Development,&#8221; will focus on how Xmsr is regulated, via elements located upstream of the coding region of the gene, in neural (specifically retinal) development in Xenopus laevis (aka the African Clawed Frog).  Xmsr, which stands for &#8220;Xenopus mesenchyme serpentine receptor,&#8221; is a gene which codes for a G-protein coupled receptor that is important in vascular and neural development in vertebrates.  While its role in vascular development is well characterized, not much research has been devoted to understanding how Xmsr is regulated in neural development.</p>
<p>That&#8217;s where I come in.</p>
<p>In order to study Xmsr&#8217;s regulation, 2,200 nucleotide bases of the upstream region were cloned and incorporated into a transgene to drive expression of GFP (Green Fluorescent Protein).  This transgene was then injected into frog sperm nuclei to create special transgenic frogs, which are easily distinguishable from wild type, endogenous frogs by their green glowing nervous systems.  I have compared the expression of GFP in the transgenic frog embryos to the expression of Xmsr in endogenous frog embryos.  The visible differences in expression patterns suggest that key regulatory elements of Xmsr are absent within the 2,200 base upstream region driving the transgene.  Starting this summer and continuing throughout the year, I will attempt to identify the(se) regulator element(s), using a bioinformatic and transgenic approach.</p>
<p>Wish me luck!</p>
<p>Aly</p>
]]></content:encoded>
			<wfw:commentRss>http://honorsfellows.blogs.wm.edu/2013/05/18/roll-up-those-sleeves-were-10-days-out/feed/</wfw:commentRss>
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		<title>All the World’s a Stage: Process, Irony, and Trying on Shoes</title>
		<link>http://ccsummerresearch.blogs.wm.edu/2013/05/18/all-the-worlds-a-stage-process-irony-and-trying-on-shoes/</link>
		<comments>http://ccsummerresearch.blogs.wm.edu/2013/05/18/all-the-worlds-a-stage-process-irony-and-trying-on-shoes/#comments</comments>
		<pubDate>Sat, 18 May 2013 20:02:39 +0000</pubDate>
		<dc:creator>Ally</dc:creator>
				<category><![CDATA[Honors Thesis]]></category>
		<category><![CDATA[Research]]></category>

		<guid isPermaLink="false">http://ccsummerresearch.blogs.wm.edu/?p=7718</guid>
		<description><![CDATA[When given this blog assignment, I was asked to discuss the process of my research in order that you might become a part of my &#8220;intellectual journey.&#8221; To that end, I want to share with you what it looks like for a nineteen-year-old undergraduate to be a religious studies professor&#8217;s &#160;research assistant. While my next [...]]]></description>
				<content:encoded><![CDATA[When given this blog assignment, I was asked to discuss the process of my research in order that you might become a part of my “intellectual journey.” To that end, I want to share with you what it looks like for a nineteen-year-old undergraduate to be a religious studies professor&#8217;s  research assistant. While my next [...]]]></content:encoded>
			<wfw:commentRss>http://ccsummerresearch.blogs.wm.edu/2013/05/18/all-the-worlds-a-stage-process-irony-and-trying-on-shoes/feed/</wfw:commentRss>
		<slash:comments>0</slash:comments>
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		<title>Medieval Warfare Simulation: Week 1 Update</title>
		<link>http://upperclassmonroe.blogs.wm.edu/2013/05/18/medieval-warfare-simulation-week-1-update/</link>
		<comments>http://upperclassmonroe.blogs.wm.edu/2013/05/18/medieval-warfare-simulation-week-1-update/#comments</comments>
		<pubDate>Sat, 18 May 2013 16:41:39 +0000</pubDate>
		<dc:creator>tylerbembenek</dc:creator>
				<category><![CDATA[history]]></category>
		<category><![CDATA[Honors Thesis]]></category>
		<category><![CDATA[Research]]></category>

		<guid isPermaLink="false">http://upperclassmonroe.blogs.wm.edu/?p=8460</guid>
		<description><![CDATA[Hey all, This week has been very productive so far.&#160; The draft of the rulebook is complete and ready for playtesting, all 62 pages of it.&#160; There is still a lot of refining that needs to be done and I&#8217;m sure there are both imbalances and areas where the wording is unclear.&#160; It&#8217;s going to... <a href="http://upperclassmonroe.blogs.wm.edu/2013/05/18/medieval-warfare-simulation-week-1-update/"> [Continue Reading]</a>]]></description>
				<content:encoded><![CDATA[Hey all, This week has been very productive so far.  The draft of the rulebook is complete and ready for playtesting, all 62 pages of it.  There is still a lot of refining that needs to be done and I’m sure there are both imbalances and areas where the wording is unclear.  It’s going to... <a href="http://upperclassmonroe.blogs.wm.edu/2013/05/18/medieval-warfare-simulation-week-1-update/"> [Continue Reading]</a>]]></content:encoded>
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		<slash:comments>0</slash:comments>
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		<title>Week 1: Library of Congress, The Law, and Lots of Voicemails</title>
		<link>http://ccsummerresearch.blogs.wm.edu/2013/05/17/week-1-library-of-congress-the-law-and-lots-of-voicemails/</link>
		<comments>http://ccsummerresearch.blogs.wm.edu/2013/05/17/week-1-library-of-congress-the-law-and-lots-of-voicemails/#comments</comments>
		<pubDate>Fri, 17 May 2013 16:49:21 +0000</pubDate>
		<dc:creator>ghanamnch</dc:creator>
				<category><![CDATA[Honors Thesis]]></category>
		<category><![CDATA[Research]]></category>

		<guid isPermaLink="false">http://ccsummerresearch.blogs.wm.edu/?p=7712</guid>
		<description><![CDATA[Today marks the end of my first week of research, and also one of the most educational weeks of my life. I knew that self-guided research would take a lot of organization, self-motivation, and tenacity, but I was unprepared for the learning curve I was...]]></description>
				<content:encoded><![CDATA[Today marks the end of my first week of research, and also one of the most educational weeks of my life. I knew that self-guided research would take a lot of organization, self-motivation, and tenacity, but I was unprepared for the learning curve I was up against, and the amount of patience it would take [...]]]></content:encoded>
			<wfw:commentRss>http://ccsummerresearch.blogs.wm.edu/2013/05/17/week-1-library-of-congress-the-law-and-lots-of-voicemails/feed/</wfw:commentRss>
		<slash:comments>0</slash:comments>
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		<title>Hello from Monrovia!</title>
		<link>http://honorsfellows.blogs.wm.edu/2013/05/17/hello-from-monrovia/</link>
		<comments>http://honorsfellows.blogs.wm.edu/2013/05/17/hello-from-monrovia/#comments</comments>
		<pubDate>Fri, 17 May 2013 14:00:36 +0000</pubDate>
		<dc:creator>Will Smith</dc:creator>
				<category><![CDATA[Honors Thesis]]></category>
		<category><![CDATA[Research]]></category>

		<guid isPermaLink="false">http://honorsfellows.blogs.wm.edu/?p=3166</guid>
		<description><![CDATA[Hello again, I have been in Monrovia for about a week now, and my research is progressing quickly. In addition to getting settled and adjusted to life in Liberia, I have had the opportunity to meet with many of the high-ranking officials who oversee the fishing industry in Liberia. With the help of my main&#8230;<br /><span><a href="http://honorsfellows.blogs.wm.edu/2013/05/17/hello-from-monrovia/">Read More</a></span>]]></description>
				<content:encoded><![CDATA[<p>Hello again,</p>
<div id="attachment_3168" class="wp-caption alignnone" style="width: 310px"><a href="http://honorsfellows.blogs.wm.edu/2013/05/17/hello-from-monrovia/cimg0260/" rel="attachment wp-att-3168"><img class="size-medium wp-image-3168" alt="Roberts International Airport" src="http://honorsfellows.blogs.wm.edu/files/2013/05/CIMG0260-300x225.jpg" width="300" height="225" /></a><p class="wp-caption-text">Roberts International Airport</p></div>
<p><span id="more-3166"></span></p>
<p>I have been in Monrovia for about a week now, and my research is progressing quickly. In addition to getting settled and adjusted to life in Liberia, I have had the opportunity to meet with many of the high-ranking officials who oversee the fishing industry in Liberia. With the help of my main contact in Liberia, Sheck Sherif, I had the chance to meet with the Coordinator of the Bureau of National Fisheries (BNF), William Y. Boeh, and many other BNF staff members on Tuesday, May 14. After explaining my study and receiving their approval, the BNF graciously offered me office space in their building and two staff members who will work full-time on my project.</p>
<div id="attachment_3170" class="wp-caption alignnone" style="width: 310px"><a href="http://honorsfellows.blogs.wm.edu/2013/05/17/hello-from-monrovia/cimg0265/" rel="attachment wp-att-3170"><img class="size-medium wp-image-3170" alt="Meeting at the Bureau of National Fisheries with Coordinator William Y. Boeh (far left), my main contact Sheck Sherif (far right), and other BNF staff members." src="http://honorsfellows.blogs.wm.edu/files/2013/05/CIMG0265-300x225.jpg" width="300" height="225" /></a><p class="wp-caption-text">Meeting at the Bureau of National Fisheries with Coordinator William Y. Boeh (far left), my main contact Sheck Sherif (far right), and other BNF staff members.</p></div>
<p>With the bureaucratic approval behind me, I have made major strides in collecting background information about the seven fishing communities in Montserrado County. Professor Roessler and I have analyzed the data and decided that five of the seven communities in Montserrado are similar enough for random selection. Starting next week, I will visit one of the communities not chosen for the study to do some ethnographic research and try to get a better sense of what life is like for them, how they conceive of fishing productivity, and how the solar lights will help. Next, I will pilot two different versions of the Liberia Energy Network&#8217;s solar lights with a random fisherman from the same village to determine which model of the light should be used for the study. At that point, I will be ready to randomly select my 75 participants and implement the baseline survey.</p>
<p>Outside of my research, I have had the opportunity to do some exploring in Monrovia. While it is clear that the 14-year civil war (1989-2003) has had devastating effects on the city&#8217;s infrastructure and formal economy, the people appear positive and eager to see Liberia develop. The streets are flooded with markets and Liberian taxis, and everyone is constantly communicating via their mobile phones.</p>
<div id="attachment_3172" class="wp-caption alignnone" style="width: 310px"><a href="http://honorsfellows.blogs.wm.edu/2013/05/17/hello-from-monrovia/cimg0268/" rel="attachment wp-att-3172"><img class="size-medium wp-image-3172" alt="Pen-Pens: Liberian taxis" src="http://honorsfellows.blogs.wm.edu/files/2013/05/CIMG0268-300x225.jpg" width="300" height="225" /></a><p class="wp-caption-text">Pen-Pens: Liberian taxis</p></div>
<p>Aside from my communication with the employees at the BNF, I have not interacted with the locals as much as I would like. However, Sheck&#8217;s younger brother, Solo, plays for a semi-profession soccer team in Monrovia, and he has offered to bring me to their practices this weekend. Not only will these practices give me the chance to meet more Liberians, but they also provide me an opportunity to show them that Americans can play football too!</p>
<p>That is all for now. By the time I write my next post, the solar lights should be in the hands of the two treatment groups and the study will be underway!</p>
<p>Will</p>
<p>&nbsp;</p>
]]></content:encoded>
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		<title>Cross-Cultural Differences in Response to Images of Emotional Faces</title>
		<link>http://honorsfellows.blogs.wm.edu/2013/05/16/cross-cultural-differences-in-response-to-images-of-emotional-faces/</link>
		<comments>http://honorsfellows.blogs.wm.edu/2013/05/16/cross-cultural-differences-in-response-to-images-of-emotional-faces/#comments</comments>
		<pubDate>Thu, 16 May 2013 18:57:39 +0000</pubDate>
		<dc:creator>Katie Adams</dc:creator>
				<category><![CDATA[Honors Thesis]]></category>
		<category><![CDATA[Research]]></category>

		<guid isPermaLink="false">http://honorsfellows.blogs.wm.edu/?p=3162</guid>
		<description><![CDATA[Hello! My name is Katie, and I&#8217;m a rising senior, majoring in Psychology and hoping to minor in Computer Science. This summer I will begin research for my psychology honor&#8217;s thesis, and I&#8217;m excited to share my progress on this blog! Unfortunately, I&#8217;m unable to divulge too much detailed information about my hypotheses and progress&#8230;<br /><span><a href="http://honorsfellows.blogs.wm.edu/2013/05/16/cross-cultural-differences-in-response-to-images-of-emotional-faces/">Read More</a></span>]]></description>
				<content:encoded><![CDATA[<p>Hello! My name is Katie, and I’m a rising senior, majoring in Psychology and hoping to minor in Computer Science. This summer I will begin research for my psychology honor’s thesis, and I’m excited to share my progress on this blog! Unfortunately, I’m unable to divulge too much detailed information about my hypotheses and progress until the study is complete, since students reading this blog might be among my subject pool. Below I describe the main goals and questions addressed by this project.</p>
<p><span id="more-3162"></span></p>
<p>My advisor, Professor Joanna Schug, is one of the pioneering researchers of  new cross-cultural psychology paradigm called relational mobility. Relational mobility describes the degree of fluidity in social bonds within a community. When relational mobility is high, it is easy to form new relationships and leave old ones, and when it is low, relational groups change much less often and easily. A particularly stark difference in relational mobility has been found between America (very high relational mobility) and Japan (very low relational mobility). Professor Schug and I have since been interested in uncovering some of the social implications of relational mobility. So far, relational mobility has been found to affect similarity of relational partners, the degree of small talk, trust in strangers, and willingness to divulge personal information.</p>
<p>The way that relational mobility affects social norms governing interactions with strangers is the most relevant implication to my honor’s thesis. Many psychology studies in America have found that people respond in particular ways when presented with a visual image of a stranger’s face, particularly a face showing intense emotion. These reactions are then often generalized as being automatic and universal human traits. This is problematic, because psychological tendencies found in one culture do not necessarily apply to other cultures as well. A pioneering 2010 study by Henrich, Heine, and Norenzayan found that people in other countries responded very differently to standard psychological tests, such as the Asch conformity task, than American participants. Yet most psychological research is still performed on the very homogenous population of American undergraduate students.</p>
<p>In collaboration with colleagues in Japan, I will be conducting a study examining how American and Japanese students respond to facial images of strangers. Because America and Japan have such different levels of relational mobility, which influences how people interact with strangers, it is possible that the human response to emotional faces is more culture- and context-dependent than previously thought.</p>
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		<title>The Effects of Microwave Irradiation on Glaser-Hay Coupling Reactions</title>
		<link>http://ccsummerresearch.blogs.wm.edu/2013/05/16/the-effects-of-microwave-irradiation-on-glaser-hay-coupling-reaxtions/</link>
		<comments>http://ccsummerresearch.blogs.wm.edu/2013/05/16/the-effects-of-microwave-irradiation-on-glaser-hay-coupling-reaxtions/#comments</comments>
		<pubDate>Thu, 16 May 2013 18:57:11 +0000</pubDate>
		<dc:creator>retyler</dc:creator>
				<category><![CDATA[Honors Thesis]]></category>
		<category><![CDATA[Research]]></category>
		<category><![CDATA[Abstract]]></category>

		<guid isPermaLink="false">http://ccsummerresearch.blogs.wm.edu/?p=7704</guid>
		<description><![CDATA[I will be producing a small molecule library of small molecules, specifically bisacetylenes, with varying functionalities that will be tested on miRNAs with the hypothesis that they will have some effect of the regulation of miRNA&#8217;s. &#160;The misregulation of miRNAs has been attributed to the cause of various cancers and diseases; therefore, being able to [...]]]></description>
				<content:encoded><![CDATA[I will be producing a small molecule library of small molecules, specifically bisacetylenes, with varying functionalities that will be tested on miRNAs with the hypothesis that they will have some effect of the regulation of miRNA&#8217;s.  The misregulation of miRNAs has been attributed to the cause of various cancers and diseases; therefore, being able to [...]]]></content:encoded>
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		<slash:comments>0</slash:comments>
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		<title>Memory and Contested History: Penitentiary Poetry of the Spanish Civil War</title>
		<link>http://honorsfellows.blogs.wm.edu/2013/05/16/memory-and-contested-history-penitentiary-poetry-of-the-spanish-civil-war/</link>
		<comments>http://honorsfellows.blogs.wm.edu/2013/05/16/memory-and-contested-history-penitentiary-poetry-of-the-spanish-civil-war/#comments</comments>
		<pubDate>Thu, 16 May 2013 17:10:45 +0000</pubDate>
		<dc:creator>cdenright</dc:creator>
				<category><![CDATA[Honors Thesis]]></category>
		<category><![CDATA[Research]]></category>
		<category><![CDATA[Abstract]]></category>

		<guid isPermaLink="false">http://honorsfellows.blogs.wm.edu/?p=3154</guid>
		<description><![CDATA[Hello, my name is Crosby Enright and I am a rising senior from Groton, Massachusetts! I am so thrilled to be able to pursue an honors fellowship this summer thanks to the generosity of the Charles Center and alumni donors. I have been a passionate learner throughout my school career and I am excited to&#8230;<br /><span><a href="http://honorsfellows.blogs.wm.edu/2013/05/16/memory-and-contested-history-penitentiary-poetry-of-the-spanish-civil-war/">Read More</a></span>]]></description>
				<content:encoded><![CDATA[<p>Hello, my name is Crosby Enright and I am a rising senior from Groton, Massachusetts! I am so thrilled to be able to pursue an honors fellowship this summer thanks to the generosity of the Charles Center and alumni donors. I have been a passionate learner throughout my school career and I am excited to finally have the opportunity to construct my own research project on a topic that is incredibly meaningful to me!</p>
<p><span id="more-3154"></span></p>
<p>For my research project this summer, I propose to analyze the life and work of three twentieth century Spanish poets, Miguel Hernández, Marcos Ana, and Ángeles García-Madrid. All three poets supported the democratic Republican cause during the Spanish Civil War (1936-1939) and worked as political activists and volunteers. After the victory of Francisco Franco’s nationalist forces however, they used their art and writing to record and criticize the grand injustice of the regime. Theorist José Ignacio Álvarez Fernández proposes that the numerous testimonies written by political prisoners of the Franco regime represent a “community of memory,” which preserves the personal and collective history of the republican side of the Spanish Civil War. I will analyze how the poetry of Ana, García-Madrid, and Hernández helps to form this “community of memory.” I will further analyze how their poetry and art works within this community to preserve the history of the “losers” of the war and honor their memory.</p>
<p>This research represents the culmination of my past three years of study within the Hispanic Studies department at WM. I was introduced to the work of Hernández as a freshman and have maintained a strong interest in his life and work ever since. I cannot wait to get started!</p>
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		<title>Project Overview: The Effects of Foreign Embargos on Conflict Minerals</title>
		<link>http://honorsfellows.blogs.wm.edu/2013/05/16/project-overview-the-effects-of-foreign-embargos-on-conflict-minerals/</link>
		<comments>http://honorsfellows.blogs.wm.edu/2013/05/16/project-overview-the-effects-of-foreign-embargos-on-conflict-minerals/#comments</comments>
		<pubDate>Thu, 16 May 2013 12:06:49 +0000</pubDate>
		<dc:creator>jacobsprang</dc:creator>
				<category><![CDATA[Honors Thesis]]></category>
		<category><![CDATA[Research]]></category>

		<guid isPermaLink="false">http://honorsfellows.blogs.wm.edu/?p=3106</guid>
		<description><![CDATA[In my project, I plan on analyzing the effectiveness of foreign embargoes on conflict minerals with respect to reducing conflict. Recent intrastate conflicts, particularly those in Africa, including the civil wars in Sierra Leone, Liberia, Democratic Republic of Congo, and Angola, have brought international attention to conflict minerals and the role of extractive industries in&#8230;<br /><span><a href="http://honorsfellows.blogs.wm.edu/2013/05/16/project-overview-the-effects-of-foreign-embargos-on-conflict-minerals/">Read More</a></span>]]></description>
				<content:encoded><![CDATA[<p>In my project, I plan on analyzing the effectiveness of foreign embargoes on conflict minerals with respect to reducing conflict. Recent intrastate conflicts, particularly those in Africa, including the civil wars in Sierra Leone, Liberia, Democratic Republic of Congo, and Angola, have brought international attention to conflict minerals and the role of extractive industries in warmongering. A major point of contention within scholarly and activism circles is whether the international community should place embargoes on minerals mined in conflict zones. Some organizations propose that such restrictions would result in decreased violence because it would restrict a major source of funding and incentive for militant groups. Others claim that embargoes would increase unemployment and economic strife, forcing young men to take up arms in order to make a living. Having heard both sides of the argument, I will test the hypothesis that in the embargoes of conflict minerals will lead to an increase in violence in the short-run but a decrease in the long run. I predict that the initial shock of unemployment will result in a greater supply of soldiers. However, over time, this shock should be offset as the labor market shifts to another industry. Additionally, as the embargoes begin to affect the economic bases of militant groups, large-scale violence will become less prevalent, and these groups will seek mediation.<br />
My project will use the Angolan Civil War and the De Beers embargo of UNITA-mined diamonds. The bulk of my research will consist of qualitative analysis, gathered through interviews with former members of UNITA and individuals involved with the embargo. I will also be interviewing and speaking with experts on the conflict and the subject matter. This qualitative research will provide invaluable insight on the effectiveness of the De Beers campaign. It will also allow for speculation on the possible effectiveness of proposed embargoes on conflict minerals from Eastern Congo, which has been embattled with intrastate conflict for over a decade. In addition to quantitative analysis, I plan on running two-stage econometric analysis on the Angolan conflict to examine if there is any correlation between the embargo and a reduction of violence over time.<br />
I am very fortunate in that I am currently in South Africa, giving me the ability to meet with experts on the conflict and members of UNITA with relative ease. I am very grateful for this opportunity and excited to begin this project.</p>
<p><span id="more-3106"></span></p>
<p>Cheers,</p>
<p>Jacob Sprang</p>
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		<title>Development of Photo-caged Bioactive Compounds</title>
		<link>http://honorsfellows.blogs.wm.edu/2013/05/15/development-of-photo-caged-bioactive-compounds/</link>
		<comments>http://honorsfellows.blogs.wm.edu/2013/05/15/development-of-photo-caged-bioactive-compounds/#comments</comments>
		<pubDate>Thu, 16 May 2013 03:15:03 +0000</pubDate>
		<dc:creator>jrmckenna</dc:creator>
				<category><![CDATA[Honors Thesis]]></category>
		<category><![CDATA[Research]]></category>

		<guid isPermaLink="false">http://honorsfellows.blogs.wm.edu/?p=3142</guid>
		<description><![CDATA[Hi there! My name is Jaclyn McKenna. I&#8217;m from Long Island, New York and I am a senior Chemistry and Kinesiology major at the College.&#160; You might recognize me from the basketball team, but I have also been conducting research now for two years in Dr. Young&#8217;s bioorganic chemistry lab. Through organic synthesis and molecular&#8230;<br /><span><a href="http://honorsfellows.blogs.wm.edu/2013/05/15/development-of-photo-caged-bioactive-compounds/">Read More</a></span>]]></description>
				<content:encoded><![CDATA[<p>Hi there! My name is Jaclyn McKenna. I&#8217;m from Long Island, New York and I am a senior Chemistry and Kinesiology major at the College.  You might recognize me from the basketball team, but I have also been conducting research now for two years in Dr. Young&#8217;s bioorganic chemistry lab.</p>
<p><span id="more-3142"></span></p>
<p>Through organic synthesis and molecular biology techniques, I am working towards developing various photo-caged bioactive compounds.  Essentially, I am taking active molecules and synthesizing them with a photo-protecting group, rendering the molecule inactive.  Then, upon UV-light exposure the photo-protecting group is removed and the molecule regains it&#8217;s functionality.  This type of technology has potential in drug therapy because it provides an added degree of special and temporal control, eliminating the unfortunate side effects caused by current chemotherapeutic agents.</p>
<p>For example, theophylline, is a small organic ligand that is capable of binding to an RNA ribozyme and induces self-cleavage to release a microRNA.  MicroRNA are relatively short, single stranded RNA fragments capable of suppressing the translation of a specific protein by complimentary base-pairing to messenger RNA. Therefore, in the presence of free theophylline, the microRNA is produced and the expression of the particular protein is suppressed.  However, if a photo-protecting group is present on the theophylline molecule, this mechanism is inactivated until the system is exposed to UV-light.</p>
<p><a href="http://ccsummerresearch.blogs.wm.edu/2013/05/03/development-of-photo-caged-bioactive-compounds/theo/" rel="attachment wp-att-7502"><img alt="theo" src="http://ccsummerresearch.blogs.wm.edu/files/2013/05/theo-300x110.png" width="300" height="110" /></a></p>
<p>Additionally, I have been using this technique to synthesize unnatural amino acids.    Unnatural amino acids serve as a mechanism to expand the genetic code and study the effects of diverse functional groups on proteins.  Site-specific incorporation of these newly synthesized protein building blocks involves significant manipulation of translational machinery. For example, a photo-caged amino acid with an alkynyl group can serve as a handle for “click” reactions. Thus, a therapeutic agent, such as an antibody or miRNA, can be conjugated into the protein and also be readily photo-cleaved with light.</p>
<p>Thank you for following my blog, I&#8217;m excited to get working on these projects this summer.</p>
<p>- Jackie</p>
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